Transcript: lnc-IL17A-5:1

Basic information

LNCipedia transcript ID: lnc-IL17A-5:1 
LNCipedia gene ID: lnc-IL17A-5
Location (hg38): chr6:52397558-52398148
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 235 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000449181.1; RP1-304B14.3-001; OTTHUMT00000040904.1; NONHSAT113106
Alternative gene names: ENSG00000231577.1; RP1-304B14.3; OTTHUMG00000014847.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 32.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17A-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EFHC1-1:1
4.0 lnc-EFHC1-1:1
4.1 lnc-EFHC1-1:1
5.0 lnc-EFHC1-1:1
5.1 lnc-HCRTR2-19:1
5.2 lnc-IL17A-5:1