Transcript: lnc-IL17B-5:2

Basic information

LNCipedia transcript ID: lnc-IL17B-5:2 
LNCipedia gene ID: lnc-IL17B-5
Ensembl Gene ID: ENSG00000275871
Ensembl Transcript ID: ENST00000622374
Location (hg38): chr5:149425771-149428289
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 422 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000622374.1
Alternative gene names: ENSG00000275871.1; RP11-394O4.6; AC131025.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -399.1853 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17B-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-IL17B-5:2
4.1 lnc-IL17B-5:2
5.0 lnc-IL17B-5:2
5.1 lnc-FAXDC2-79:2
5.2 lnc-IL17B-5:2