Transcript: lnc-IL17RA-19:1

Basic information

LNCipedia transcript ID: lnc-IL17RA-19:1 
LNCipedia gene ID: lnc-IL17RA-19
Ensembl Gene ID: ENSG00000273362
Ensembl Transcript ID: ENST00000609641
Location (hg38): chr22:16521059-16527237
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 661 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609641.1
Alternative gene names: ENSG00000273362.1; KB-67B5.17; AP000547.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.684 non-coding 
CPAT coding probability 40.89% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IL17RA-19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17RA-19:1
4.0 lnc-IL17RA-19:1
4.1 lnc-IL17RA-19:1
5.0 lnc-IL17RA-19:1
5.1 lnc-SERPIND1-93:1
5.2 lnc-IL17RA-19:1