Transcript: lnc-IL17RA-33:8

Basic information

LNCipedia transcript ID: lnc-IL17RA-33:8 
LNCipedia gene ID: lnc-IL17RA-33
Location (hg38): chr22:17044870-17057223
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 385 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT083177
Alternative gene names: SAHL1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.7038 non-coding 
CPAT coding probability 5.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17RA-33:8 no no no no

Available literature

  1. Zhang (2015), Cancer Specific Long Noncoding RNAs Show Differential Expression Patterns and Competing Endogenous RNA Potential in Hepatocellular Carcinoma., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17RA-2:8
4.0 CECR7:8
4.1 CECR7:8
5.0 CECR7:8
5.1 lnc-SERPIND1-83:8
5.2 lnc-IL17RA-33:8