Transcript: lnc-IL17RA-36:30

Basic information

LNCipedia transcript ID: lnc-IL17RA-36:30 
LNCipedia gene ID: lnc-IL17RA-36
Location (hg38): chr22:16637020-16638980
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 473 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT083143; ENST00000585784.1
Alternative gene names: ENSG00000100181.17; TPTEP1; ENSG00000100181.21


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.0374 non-coding 
CPAT coding probability 3.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17RA-36:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17RA-4:16
4.0 lnc-IL17RA-4:16
4.1 lnc-IL17RA-4:16
5.0 lnc-IL17RA-4:16
5.1 lnc-SERPIND1-90:30
5.2 lnc-IL17RA-36:30