Transcript: lnc-IL17RA-36:31

Basic information

LNCipedia transcript ID: lnc-IL17RA-36:31 
LNCipedia gene ID: lnc-IL17RA-36
Location (hg38): chr22:16638579-16640737
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1602 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT083144; ENST00000588424.1
Alternative gene names: ENSG00000100181.17; TPTEP1; ENSG00000100181.21


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.3618 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17RA-36:31 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17RA-4:17
4.0 lnc-IL17RA-4:17
4.1 lnc-IL17RA-4:17
5.0 lnc-IL17RA-4:17
5.1 lnc-SERPIND1-90:31
5.2 lnc-IL17RA-36:31