Transcript: lnc-IL23A-2:8

Basic information

LNCipedia transcript ID: lnc-IL23A-2:8 
LNCipedia gene ID: lnc-IL23A-2
Location (hg38): chr12:56307643-56309315
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1673 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT028807; FPKM1_group_6289_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.2168 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL23A-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL23A-1:2
4.0 lnc-IL23A-1:2
4.1 lnc-IL23A-2:8
5.0 lnc-IL23A-2:8
5.1 lnc-CDK2-34:8
5.2 lnc-IL23A-2:8