Transcript: lnc-IL2RG-5:2

Basic information

LNCipedia transcript ID: lnc-IL2RG-5:2 
LNCipedia gene ID: lnc-IL2RG-5
Location (hg38): chrX:71161697-71182076
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 20380 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000113861.1|ENCT00000478100.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
QPGACTKSK 92.3076923076923% sense-1
Lee translation initiation sites non-coding 
PhyloCSF score 309.9846 coding 
CPAT coding probability 4.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IL2RG-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IL2RG-5:2
5.0 lnc-IL2RG-5:2
5.1 lnc-ZMYM3-5:3
5.2 lnc-IL2RG-5:2