Transcript: lnc-IL34-3:1

Basic information

LNCipedia transcript ID: lnc-IL34-3:1 
LNCipedia gene ID: lnc-IL34-3
Location (hg38): chr16:70802087-70806136
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3791 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000513068; TCONS_00024294; NONHSAT143451
Alternative gene names: ENSG00000251103; XLOC_011772; linc-CALB2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.4854 non-coding 
CPAT coding probability 3.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL34-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IL34-1:1
3.1 lnc-IL34-3:1
4.0 lnc-IL34-3:1
4.1 lnc-IL34-3:1
5.0 lnc-IL34-3:1
5.1 lnc-CALB2-7:1
5.2 lnc-IL34-3:1