Transcript: lnc-IL37-5:2

Basic information

LNCipedia transcript ID: lnc-IL37-5:2 
LNCipedia gene ID: lnc-IL37-5
Location (hg38): chr2:112880368-112886162
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1514 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000044210.1|HBMT00000775115.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.5829 non-coding 
CPAT coding probability 3.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL37-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IL37-5:2
5.0 lnc-IL37-5:2
5.1 lnc-SULT1C4-69:2
5.2 lnc-IL37-5:2