Transcript: lnc-IL6-3:3

Basic information

LNCipedia transcript ID: lnc-IL6-3:3 
LNCipedia gene ID: lnc-IL6-3
Location (hg38): chr7:22563344-22573996
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2425 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00012870
Alternative gene names: XLOC_006009; linc-IL6-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.6606 non-coding 
CPAT coding probability 3.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL6-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IL6-3:3
3.1 lnc-IL6-3:3
4.0 lnc-IL6-3:3
4.1 lnc-IL6-3:3
5.0 lnc-IL6-3:3
5.1 lnc-SNX10-76:16
5.2 lnc-IL6-3:3