Transcript: lnc-INAVA-1:11

Basic information

LNCipedia transcript ID: lnc-INAVA-1:11 
LNCipedia gene ID: lnc-INAVA-1
Ensembl Gene ID: ENSG00000234132
Ensembl Transcript ID: ENST00000610411
Location (hg38): chr1:201031136-201036675
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 556 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610411.1
Alternative gene names: ENSG00000234132.2; RP11-168O16.2; AL358473.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.6724 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INAVA-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C1orf106-1:6
4.1 lnc-C1orf106-1:6
5.0 lnc-C1orf106-1:6
5.1 lnc-ADORA1-63:12
5.2 lnc-INAVA-1:11