Transcript: lnc-ING1-1:3

Basic information

LNCipedia transcript ID: lnc-ING1-1:3 
LNCipedia gene ID: lnc-ING1-1
Location (hg38): chr13:110824862-110839146
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1667 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021905; NONHSAT035178
Alternative gene names: XLOC_010500; linc-ARHGEF7-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.4128 non-coding 
CPAT coding probability 8.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ING1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ING1-1:3
3.1 lnc-ING1-1:3
4.0 lnc-ING1-1:3
4.1 lnc-ING1-1:3
5.0 lnc-ING1-1:3
5.1 lnc-COL4A2-14:5
5.2 lnc-ING1-1:3