Transcript: lnc-INO80D-10:2

Basic information

LNCipedia transcript ID: lnc-INO80D-10:2 
LNCipedia gene ID: lnc-INO80D-10
Ensembl Gene ID: ENSG00000225216
Ensembl Transcript ID: ENST00000598710
Location (hg38): chr2:205756469-205763953
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 534 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT076521; ENST00000598710.1; ENST00000598710.5
Alternative gene names: ENSG00000225216.2; AC007362.3; ENSG00000225216.6; AC007362.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -290.8073 non-coding 
CPAT coding probability 22.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INO80D-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-INO80D-2:3
4.0 lnc-INO80D-2:3
4.1 lnc-INO80D-2:3
5.0 lnc-INO80D-2:3
5.1 lnc-HSPD1-97:2
5.2 lnc-INO80D-10:2