Transcript: lnc-INPPL1-3:1

Basic information

LNCipedia transcript ID: lnc-INPPL1-3:1 
LNCipedia gene ID: lnc-INPPL1-3
Ensembl Gene ID: ENSG00000255672
Ensembl Transcript ID: ENST00000537727
Location (hg38): chr11:72354516-72363555
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 550 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000537727.1; RP11-45F15.2-001; OTTHUMT00000396900.1; NONHSAT022770
Alternative gene names: ENSG00000255672.1; RP11-45F15.2; OTTHUMG00000167905.1; AP002892.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.9707 non-coding 
CPAT coding probability 5.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INPPL1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-INPPL1-3:1
4.0 lnc-INPPL1-3:1
4.1 lnc-INPPL1-3:1
5.0 lnc-INPPL1-3:1
5.1 lnc-TCIRG1-95:1
5.2 lnc-INPPL1-3:1