Transcript: lnc-INS-IGF2-1:1

Basic information

LNCipedia transcript ID: lnc-INS-IGF2-1:1 
LNCipedia gene ID: lnc-INS-IGF2-1
Ensembl Gene ID: ENSG00000240801
Ensembl Transcript ID: ENST00000430034
Location (hg38): chr11:2129121-2129964
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 373 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430034.1; AC132217.4-001; OTTHUMT00000026052.1; NONHSAT017479
Alternative gene names: ENSG00000240801.1; AC132217.4; OTTHUMG00000009394.2; AC132217.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.6042 non-coding 
CPAT coding probability 4.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INS-IGF2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-INS-IGF2-1:1
4.0 lnc-INS-IGF2-1:1
4.1 lnc-INS-IGF2-1:1
5.0 lnc-INS-IGF2-1:1
5.1 lnc-OR52A1-55:1
5.2 lnc-INS-IGF2-1:1