Transcript: lnc-INSC-3:1

Basic information

LNCipedia transcript ID: lnc-INSC-3:1 
LNCipedia gene ID: lnc-INSC-3
Location (hg38): chr11:15910949-15918541
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 546 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000528194; ENST00000528194.1; RP11-222N13.1-002; OTTHUMT00000386623.1; NONHSAT018161
Alternative gene names: ENSG00000254661; RP11-222N13.1; ENSG00000254661.1; OTTHUMG00000165844.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.7895 non-coding 
CPAT coding probability 5.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INSC-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-INSC-3:1
3.1 lnc-INSC-3:1
4.0 lnc-INSC-3:1
4.1 lnc-INSC-3:1
5.0 lnc-INSC-3:1
5.1 lnc-NUCB2-17:1
5.2 lnc-INSC-3:1