Transcript: lnc-INSL6-1:1

Basic information

LNCipedia transcript ID: lnc-INSL6-1:1 
LNCipedia gene ID: lnc-INSL6-1
Location (hg38): chr9:5131979-5164251
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 443 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000510407.1; RP11-39K24.10-001; OTTHUMT00000051613.1; NONHSAT130092
Alternative gene names: ENSG00000249864.1; RP11-39K24.10; OTTHUMG00000019491.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.0759 non-coding 
CPAT coding probability 13.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INSL6-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-INSL6-1:1
4.0 lnc-INSL6-1:1
4.1 lnc-INSL6-1:1
5.0 lnc-INSL6-1:1
5.1 lnc-CER1-60:1
5.2 lnc-INSL6-1:1