Transcript: lnc-INTS8-1:2

Basic information

LNCipedia transcript ID: lnc-INTS8-1:2 
LNCipedia gene ID: lnc-INTS8-1
Ensembl Gene ID: ENSG00000253878
Ensembl Transcript ID: ENST00000519034
Location (hg38): chr8:94950225-94951396
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 449 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000519034.1; RP11-347C18.3-002; OTTHUMT00000379954.1; NONHSAT127810
Alternative gene names: ENSG00000253878.1; RP11-347C18.3; OTTHUMG00000164729.1; ENSG00000253878.5; AC087752.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -146.4119 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INTS8-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-INTS8-1:2
4.0 lnc-INTS8-1:2
4.1 lnc-INTS8-1:2
5.0 lnc-INTS8-1:2
5.1 lnc-CA2-111:4
5.2 lnc-INTS8-1:2