Transcript: lnc-IPCEF1-6:1

Basic information

LNCipedia transcript ID: lnc-IPCEF1-6:1 
LNCipedia gene ID: lnc-IPCEF1-6
Location (hg38): chr6:154397327-154404179
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2191 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT115641
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -48.3018 non-coding 
CPAT coding probability 2.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IPCEF1-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CNKSR3-1:1
4.0 lnc-CNKSR3-1:1
4.1 lnc-CNKSR3-1:1
5.0 lnc-CNKSR3-1:1
5.1 lnc-SYNE1-19:1
5.2 lnc-IPCEF1-6:1