Transcript: lnc-IQCK-1:2

Basic information

LNCipedia transcript ID: lnc-IQCK-1:2 
LNCipedia gene ID: lnc-IQCK-1
Location (hg38): chr16:19923570-19929259
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 285 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024814; NONHSAT140913
Alternative gene names: XLOC_011660; linc-ACSM5-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.7915 non-coding 
CPAT coding probability 3.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IQCK-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IQCK-1:2
3.1 lnc-IQCK-1:2
4.0 lnc-IQCK-1:2
4.1 lnc-IQCK-1:2
5.0 lnc-IQCK-1:2
5.1 lnc-TMC5-16:3
5.2 lnc-IQCK-1:2