Transcript: lnc-IQCM-1:2

Basic information

LNCipedia transcript ID: lnc-IQCM-1:2 
LNCipedia gene ID: lnc-IQCM-1
RefSeq ID: NR_134681
Location (hg38): chr4:148940946-148942378
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 365 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134681.1
Alternative gene names: LOC105377480


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -109.3218 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IQCM-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-NR3C2-2:3
5.1 lnc-NR3C2-2:3
5.2 lnc-IQCM-1:2