Transcript: lnc-IRF3-2:1

Basic information

LNCipedia transcript ID: lnc-IRF3-2:1 
LNCipedia gene ID: lnc-IRF3-2
Location (hg38): chr19:49688853-49690982
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 836 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000268677.1|ENST00000596472.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -67.5077 non-coding 
CPAT coding probability 6.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRF3-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IRF3-1:2
5.0 lnc-IRF3-1:2
5.1 lnc-NOSIP-7:1
5.2 lnc-IRF3-2:1