Transcript: lnc-IRF4-20:8

Basic information

LNCipedia transcript ID: lnc-IRF4-20:8 
LNCipedia gene ID: lnc-IRF4-20
Location (hg38): chr6:800667-804829
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1880 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT106143
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.175 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRF4-20:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL033381.1-20:8
4.0 lnc-AL033381.1-20:8
4.1 lnc-AL033381.1-20:8
5.0 lnc-AL033381.1-20:8
5.1 lnc-RIPK1-136:8
5.2 lnc-IRF4-20:8