Transcript: lnc-IRGC-6:1

Basic information

LNCipedia transcript ID: lnc-IRGC-6:1 
LNCipedia gene ID: lnc-IRGC-6
Location (hg38): chr19:43763720-43764262
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 543 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000039436.1|FTMT27600002142.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -100.0571 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRGC-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IRGC-6:1
5.0 lnc-IRGC-6:1
5.1 lnc-ZNF222-21:1
5.2 lnc-IRGC-6:1