Transcript: lnc-ITGB3BP-5:10

Basic information

LNCipedia transcript ID: lnc-ITGB3BP-5:10 
LNCipedia gene ID: lnc-ITGB3BP-5
Location (hg38): chr1:63440770-63447060
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 589 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT003677
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.3545 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITGB3BP-5:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB3BP-5:10
4.0 lnc-ITGB3BP-5:10
4.1 lnc-ITGB3BP-5:10
5.0 lnc-ITGB3BP-5:10
5.1 lnc-ITGB3BP-5:10
5.2 lnc-ITGB3BP-5:10