Transcript: lnc-ITM2C-2:7

Basic information

LNCipedia transcript ID: lnc-ITM2C-2:7 
LNCipedia gene ID: lnc-ITM2C-2
Location (hg38): chr2:230908919-230923559
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 598 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230385.1|MICT00000209443.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -150.1162 non-coding 
CPAT coding probability 20.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITM2C-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ITM2C-2:7
5.0 lnc-ITM2C-2:7
5.1 lnc-ARMC9-9:7
5.2 lnc-ITM2C-2:7