Transcript: lnc-ITPR3-1:13

Basic information

LNCipedia transcript ID: lnc-ITPR3-1:13 
LNCipedia gene ID: lnc-ITPR3-1
Location (hg38): chr6:33895139-33896726
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1588 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT110240
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -155.625 non-coding 
CPAT coding probability 5.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITPR3-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITPR3-1:13
4.0 lnc-ITPR3-1:13
4.1 lnc-ITPR3-1:13
5.0 lnc-ITPR3-1:13
5.1 lnc-TNF-107:6
5.2 lnc-ITPR3-1:13