Transcript: lnc-IZUMO2-2:2

Basic information

LNCipedia transcript ID: lnc-IZUMO2-2:2 
LNCipedia gene ID: lnc-IZUMO2-2
Location (hg38): chr19:50093426-50148226
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 897 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000041303.1|MICT00000179104.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 46.1589 non-coding 
CPAT coding probability 17.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IZUMO2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IZUMO2-2:2
5.0 lnc-IZUMO2-2:2
5.1 lnc-FAM71E1-25:1
5.2 lnc-IZUMO2-2:2