Transcript: lnc-JADE2-2:2

Basic information

LNCipedia transcript ID: lnc-JADE2-2:2 
LNCipedia gene ID: lnc-JADE2-2
Location (hg38): chr5:134436517-134442605
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6089 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT103857
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.6377 non-coding 
CPAT coding probability 12.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JADE2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PHF15-2:3
4.0 lnc-PHF15-2:3
4.1 lnc-PHF15-2:3
5.0 lnc-PHF15-2:3
5.1 lnc-PDLIM4-51:2
5.2 lnc-JADE2-2:2