Transcript: lnc-JADE2-2:4

Basic information

LNCipedia transcript ID: lnc-JADE2-2:4 
LNCipedia gene ID: lnc-JADE2-2
Location (hg38): chr5:134436701-134495311
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3516 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250994.1|MICT00000289229.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.1278 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JADE2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PHF15-2:6
5.0 lnc-PHF15-2:6
5.1 lnc-PDLIM4-51:4
5.2 lnc-JADE2-2:4