Transcript: lnc-JPH1-2:4

Basic information

LNCipedia transcript ID: lnc-JPH1-2:4 
LNCipedia gene ID: lnc-JPH1-2
Location (hg38): chr8:74609795-74612487
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 280 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00015452
Alternative gene names: XLOC_007121; linc-JPH1-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.9121 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JPH1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-JPH1-1:3
3.1 lnc-JPH1-2:4
4.0 lnc-JPH1-2:4
4.1 lnc-JPH1-2:4
5.0 lnc-JPH1-2:4
5.1 lnc-CPA6-106:4
5.2 lnc-JPH1-2:4