Transcript: lnc-JPH3-3:13

Basic information

LNCipedia transcript ID: lnc-JPH3-3:13 
LNCipedia gene ID: lnc-JPH3-3
Location (hg38): chr16:87493219-87500514
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3476 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260750.1|ENCT00000161551.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.9069 non-coding 
CPAT coding probability 42.53% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-JPH3-3:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-JPH3-3:13
5.0 lnc-JPH3-3:13
5.1 lnc-MAP1LC3B-3:8
5.2 lnc-JPH3-3:13