Transcript: lnc-JPH4-4:5

Basic information

LNCipedia transcript ID: lnc-JPH4-4:5 
LNCipedia gene ID: lnc-JPH4-4
Location (hg38): chr14:23699925-23729711
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 602 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023067; NONHSAT035936
Alternative gene names: XLOC_010971; linc-JPH4-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.0387 non-coding 
CPAT coding probability 15.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JPH4-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-JPH4-1:5
3.1 lnc-JPH4-1:3
4.0 lnc-JPH4-4:5
4.1 lnc-JPH4-4:5
5.0 lnc-JPH4-4:5
5.1 lnc-EFS-17:5
5.2 lnc-JPH4-4:5