Transcript: lnc-JRK-1:1

Basic information

LNCipedia transcript ID: lnc-JRK-1:1 
LNCipedia gene ID: lnc-JRK-1
Location (hg38): chr8:142666415-142681968
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 571 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT129467; ENST00000591357.1
Alternative gene names: ENSG00000234616.4; JRK


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.5117 non-coding 
CPAT coding probability 32.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JRK-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARC-1:9
4.0 lnc-ARC-1:9
4.1 lnc-ARC-1:9
5.0 lnc-ARC-1:9
5.1 lnc-SLURP2-3:1
5.2 lnc-JRK-1:1