Transcript: lnc-JUN-5:20

Basic information

LNCipedia transcript ID: lnc-JUN-5:20 
LNCipedia gene ID: lnc-JUN-5
Location (hg38): chr1:59132376-59146847
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 618 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224609.2|ENST00000592607.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -100.2956 non-coding 
CPAT coding probability 2.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JUN-5:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-JUN-5:20
5.0 lnc-JUN-5:20
5.1 lnc-C8B-34:12
5.2 lnc-JUN-5:20