Transcript: lnc-JUN-5:8

Basic information

LNCipedia transcript ID: lnc-JUN-5:8 
LNCipedia gene ID: lnc-JUN-5
Location (hg38): chr1:59132707-59146827
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 776 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT003555; ENST00000587839.1
Alternative gene names: ENSG00000224609.2; RP11-470E16.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -371.5242 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JUN-5:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-JUN-5:8
4.0 lnc-JUN-5:8
4.1 lnc-JUN-5:8
5.0 lnc-JUN-5:8
5.1 lnc-C8B-34:16
5.2 lnc-JUN-5:8