Transcript: lnc-JUN-5:9

Basic information

LNCipedia transcript ID: lnc-JUN-5:9 
LNCipedia gene ID: lnc-JUN-5
RefSeq ID: NR_027120
Location (hg38): chr1:59131936-59146807
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1043 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027120; NR_027120.1
Alternative gene names: HSD52


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.2956 non-coding 
CPAT coding probability 3.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JUN-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-JUN-5:9
4.0 lnc-JUN-5:9
4.1 lnc-JUN-5:9
5.0 lnc-JUN-5:9
5.1 lnc-C8B-34:19
5.2 lnc-JUN-5:9