Transcript: lnc-JUN-6:10

Basic information

LNCipedia transcript ID: lnc-JUN-6:10 
LNCipedia gene ID: lnc-JUN-6
Ensembl Gene ID: ENSG00000270457
Ensembl Transcript ID: ENST00000604999
Location (hg38): chr1:59289303-59289640
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 338 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT003557; ENST00000604999.1
Alternative gene names: ENSG00000270457.1; RP11-467C18.1; AC093424.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -219.3644 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JUN-6:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-JUN-13:1
4.0 lnc-JUN-13:1
4.1 lnc-JUN-6:10
5.0 lnc-JUN-6:10
5.1 lnc-C8B-35:10
5.2 lnc-JUN-6:10