Transcript: lnc-KANSL1-1:1

Basic information

LNCipedia transcript ID: lnc-KANSL1-1:1 
LNCipedia gene ID: lnc-KANSL1-1
Location (hg38): chr17:45905240-45911559
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1085 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT054184
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.9964 non-coding 
CPAT coding probability 6.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KANSL1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA1267-1:2
4.0 lnc-KIAA1267-1:2
4.1 lnc-KIAA1267-1:2
5.0 lnc-KIAA1267-1:2
5.1 lnc-GFAP-42:1
5.2 lnc-KANSL1-1:1