Transcript: lnc-KANSL2-1:2

Basic information

LNCipedia transcript ID: lnc-KANSL2-1:2 
LNCipedia gene ID: lnc-KANSL2-1
Location (hg38): chr12:48688464-48692507
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4044 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT028017
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -76.6763 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KANSL2-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCNT1-1:1
4.0 lnc-CCNT1-1:1
4.1 lnc-CCNT1-1:1
5.0 lnc-CCNT1-1:1
5.1 lnc-HDAC7-21:1
5.2 lnc-KANSL2-1:2