Transcript: lnc-KANTR-23:1

Basic information

LNCipedia transcript ID: lnc-KANTR-23:1 
LNCipedia gene ID: lnc-KANTR-23
Location (hg38): chrX:53094121-53099582
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 350 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT147731
Alternative gene names: Spasm


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -55.3515 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KANTR-23:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSPYL2-1:2
4.0 KANTR:1
4.1 KANTR:1
5.0 KANTR:1
5.1 lnc-TSR2-23:1
5.2 lnc-KANTR-23:1