Transcript: lnc-KAT7-2:2

Basic information

LNCipedia transcript ID: lnc-KAT7-2:2 
LNCipedia gene ID: lnc-KAT7-2
Location (hg38): chr17:49844674-49845922
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 451 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT054568
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.1963 non-coding 
CPAT coding probability 38.42% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KAT7-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KAT7-2:2
4.0 lnc-KAT7-2:2
4.1 lnc-KAT7-2:2
5.0 lnc-KAT7-2:2
5.1 lnc-ACSF2-26:2
5.2 lnc-KAT7-2:2