Transcript: lnc-KAT7-2:4

Basic information

LNCipedia transcript ID: lnc-KAT7-2:4 
LNCipedia gene ID: lnc-KAT7-2
Location (hg38): chr17:49842595-49845917
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 721 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000204584.1|FTMT26700006737.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -107.1963 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KAT7-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KAT7-2:4
5.0 lnc-KAT7-2:4
5.1 lnc-ACSF2-26:1
5.2 lnc-KAT7-2:4