Transcript: lnc-KBTBD4-3:1

Basic information

LNCipedia transcript ID: lnc-KBTBD4-3:1 
LNCipedia gene ID: lnc-KBTBD4-3
Ensembl Gene ID: ENSG00000270072
Ensembl Transcript ID: ENST00000366360
Location (hg38): chr11:47513605-47514889
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 430 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT021257; ENST00000366360.2
Alternative gene names: ENSG00000270072.1; RP11-750H9.7; AC090559.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.1276 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KBTBD4-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KBTBD4-3:1
4.0 lnc-KBTBD4-3:1
4.1 lnc-KBTBD4-3:1
5.0 lnc-KBTBD4-3:1
5.1 lnc-OR5W2-42:1
5.2 lnc-KBTBD4-3:1