Transcript: lnc-KCNA1-97:10

Basic information

LNCipedia transcript ID: lnc-KCNA1-97:10 
LNCipedia gene ID: lnc-KCNA1-97
Location (hg38): chr12:4978893-4981438
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 817 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020280; NONHSAT025982
Alternative gene names: XLOC_009626; linc-KCNA5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.6732 non-coding 
CPAT coding probability 18.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNA1-97:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KCNA1-1:1
3.1 lnc-KCNA1-1:1
4.0 lnc-KCNA1-1:1
4.1 lnc-KCNA1-1:1
5.0 lnc-KCNA1-1:1
5.1 lnc-CLEC4D-97:10
5.2 lnc-KCNA1-97:10