Transcript: lnc-KCNA1-97:14

Basic information

LNCipedia transcript ID: lnc-KCNA1-97:14 
LNCipedia gene ID: lnc-KCNA1-97
Ensembl Gene ID: ENSG00000256654
Ensembl Transcript ID: ENST00000640212
Location (hg38): chr12:5016238-5025552
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3030 bp
Exons: 7
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000640212.1
Alternative gene names: ENSG00000256654.3; AC005906.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -87.5103 non-coding 
CPAT coding probability 10.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNA1-97:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CLEC4D-97:14
5.1 lnc-CLEC4D-97:14
5.2 lnc-KCNA1-97:14