Transcript: lnc-KCNA1-97:16

Basic information

LNCipedia transcript ID: lnc-KCNA1-97:16 
LNCipedia gene ID: lnc-KCNA1-97
Ensembl Gene ID: ENSG00000256654
Ensembl Transcript ID: ENST00000638455
Location (hg38): chr12:5017876-5025554
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1388 bp
Exons: 6
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000638455.1
Alternative gene names: ENSG00000256654.3; AC005906.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -160.612 non-coding 
CPAT coding probability 10.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNA1-97:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CLEC4D-97:16
5.1 lnc-CLEC4D-97:16
5.2 lnc-KCNA1-97:16