Transcript: lnc-KCNA1-97:24

Basic information

LNCipedia transcript ID: lnc-KCNA1-97:24 
LNCipedia gene ID: lnc-KCNA1-97
Location (hg38): chr12:5022463-5025978
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1231 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT025984
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -256.5717 non-coding 
CPAT coding probability 11.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNA1-97:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNA5-1:2
4.0 lnc-KCNA5-1:2
4.1 lnc-KCNA5-1:2
5.0 lnc-KCNA5-1:2
5.1 lnc-CLEC4D-97:24
5.2 lnc-KCNA1-97:24