Transcript: lnc-KCNC2-6:2

Basic information

LNCipedia transcript ID: lnc-KCNC2-6:2 
LNCipedia gene ID: lnc-KCNC2-6
Ensembl Gene ID: ENSG00000273987
Ensembl Transcript ID: ENST00000617300
Location (hg38): chr12:75333798-75334486
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 689 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000617300.1
Alternative gene names: ENSG00000273987.1; RP11-585P4.6; AC121761.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -97.4874 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNC2-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-KCNC2-6:2
4.1 lnc-KCNC2-6:2
5.0 lnc-KCNC2-6:2
5.1 lnc-LRRC10-45:2
5.2 lnc-KCNC2-6:2